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» The ed-tree: An Index for Large DNA Sequence Databases
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CIKM
1997
Springer
13 years 11 months ago
Using a Sequential Index in Terrain-Aided Navigation
Terrain-aided navigation is a database application in which an aeroplane locates itself by matching the height trajectory with a terrain-elevation map on board the aircraft. Witho...
Ling Lin, Tore Risch
BTW
2009
Springer
133views Database» more  BTW 2009»
13 years 11 months ago
High-Dimensional Indexing for Multimedia Features
Abstract: Efficient content-based similarity search in large multimedia databases requires efficient query processing algorithms for many practical applications. Especially in hi...
Ira Assent, Stephan Günnemann, Hardy Kremer, ...
ICDE
2010
IEEE
750views Database» more  ICDE 2010»
13 years 12 months ago
Efficient and accurate discovery of patterns in sequence datasets
Existing sequence mining algorithms mostly focus on mining for subsequences. However, a large class of applications, such as biological DNA and protein motif mining, require effici...
Avrilia Floratou, Sandeep Tata, Jignesh M. Patel
BMCBI
2008
211views more  BMCBI 2008»
13 years 7 months ago
CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
Svetlin Manavski, Giorgio Valle
CF
2009
ACM
14 years 2 months ago
Quantitative analysis of sequence alignment applications on multiprocessor architectures
The exponential growth of databases that contains biological information (such as protein and DNA data) demands great efforts to improve the performance of computational platforms...
Friman Sánchez, Alex Ramírez, Mateo ...