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GECCO
2006
Springer
130views Optimization» more  GECCO 2006»
14 years 7 days ago
An efficient multi-objective evolutionary algorithm with steady-state replacement model
The generic Multi-objective Evolutionary Algorithm (MOEA) aims to produce Pareto-front approximations with good convergence and diversity property. To achieve convergence, most mu...
Dipti Srinivasan, Lily Rachmawati
BMCBI
2010
189views more  BMCBI 2010»
13 years 8 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
TCBB
2008
82views more  TCBB 2008»
13 years 8 months ago
Efficient Algorithms to Explore Conformation Spaces of Flexible Protein Loops
Two efficient and complementary sampling algorithms are presented to explore the space of closed clash-free conformations of a flexible protein loop. The "seed sampling" ...
Peggy Yao, Ankur Dhanik, Nathan Marz, Ryan Propper...
SPAA
2005
ACM
14 years 2 months ago
Efficient algorithms for verifying memory consistency
One approach in verifying the correctness of a multiprocessor system is to show that its execution results comply with the memory consistency model it is meant to implement. It ha...
Chaiyasit Manovit, Sudheendra Hangal
ESCIENCE
2007
IEEE
14 years 14 days ago
Grid-Enabling an Efficient Algorithm for Demanding Global Optimization Problems in Genetic Analysis
Abstract. We study the implementation on grid systems of an efficient algorithm for demanding global optimization problems. Specifically, we consider problems arising in the geneti...
Mahen Jayawardena, Sverker Holmgren