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GECCO
2006
Springer
213views Optimization» more  GECCO 2006»
14 years 2 months ago
Evolutionary unit testing of object-oriented software using strongly-typed genetic programming
Evolutionary algorithms have successfully been applied to software testing. Not only approaches that search for numeric test data for procedural test objects have been investigate...
Stefan Wappler, Joachim Wegener
BMCBI
2010
95views more  BMCBI 2010»
13 years 11 months ago
An effective approach for identification of in vivo protein-DNA binding sites from paired-end ChIP-Seq data
Background: ChIP-Seq, which combines chromatin immunoprecipitation (ChIP) with high-throughput massively parallel sequencing, is increasingly being used for identification of prot...
Congmao Wang, Jie Xu, Dasheng Zhang, Zoe A. Wilson...
BMCBI
2010
105views more  BMCBI 2010»
13 years 11 months ago
Predicting phenotypic traits of prokaryotes from protein domain frequencies
Background: Establishing the relationship between an organism's genome sequence and its phenotype is a fundamental challenge that remains largely unsolved. Accurately predict...
Thomas Lingner, Stefanie Mühlhausen, Toni Gab...
BMCBI
2008
112views more  BMCBI 2008»
13 years 11 months ago
Evaluation of genomic island predictors using a comparative genomics approach
Background: Genomic islands (GIs) are clusters of genes in prokaryotic genomes of probable horizontal origin. GIs are disproportionately associated with microbial adaptations of m...
Morgan G. I. Langille, William W. L. Hsiao, Fiona ...
BMCBI
2008
104views more  BMCBI 2008»
13 years 11 months ago
Evolutionary Pareto-optimization of stably folding peptides
Background: As a rule, peptides are more flexible and unstructured than proteins with their substantial stabilizing hydrophobic cores. Nevertheless, a few stably folding peptides ...
Wolfram Gronwald, Tim Hohm, Daniel Hoffmann