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BMCBI
2006
78views more  BMCBI 2006»
13 years 10 months ago
An evaluation of human protein-protein interaction data in the public domain
Background: Protein-protein interaction (PPI) databases have become a major resource for investigating biological networks and pathways in cells. A number of publicly available re...
Suresh Mathivanan, Balamurugan Periaswamy, T. K. B...
BMCBI
2008
149views more  BMCBI 2008»
13 years 10 months ago
Clustering of cognate proteins among distinct proteomes derived from multiple links to a single seed sequence
Background: Modern proteomes evolved by modification of pre-existing ones. It is extremely important to comparative biology that related proteins be identified as members of the s...
Adriano Barbosa-Silva, Venkata P. Satagopam, Reinh...
BMCBI
2008
128views more  BMCBI 2008»
13 years 10 months ago
SIGffRid: A tool to search for sigma factor binding sites in bacterial genomes using comparative approach and biologically drive
Background: Many programs have been developed to identify transcription factor binding sites. However, most of them are not able to infer two-word motifs with variable spacer leng...
Fabrice Touzain, Sophie Schbath, Isabelle Debled-R...
SIGMOD
2008
ACM
193views Database» more  SIGMOD 2008»
14 years 10 months ago
ARCube: supporting ranking aggregate queries in partially materialized data cubes
Supporting ranking queries in database systems has been a popular research topic recently. However, there is a lack of study on supporting ranking queries in data warehouses where...
Tianyi Wu, Dong Xin, Jiawei Han
DOCENG
2004
ACM
14 years 3 months ago
Creating structured PDF files using XML templates
This paper describes a tool for recombining the logical structure from an XML document with the typeset appearance of the corresponding PDF document. The tool uses the XML represe...
Matthew R. B. Hardy, David F. Brailsford, Peter L....