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BMCBI
2010
88views more  BMCBI 2010»
13 years 9 months ago
Proteome scanning to predict PDZ domain interactions using support vector machines
Background: PDZ domains mediate protein-protein interactions involved in important biological processes through the recognition of short linear motifs in their target proteins. Tw...
Shirley Hui, Gary D. Bader
BMCBI
2008
138views more  BMCBI 2008»
13 years 9 months ago
Using neural networks and evolutionary information in decoy discrimination for protein tertiary structure prediction
Background: We present a novel method of protein fold decoy discrimination using machine learning, more specifically using neural networks. Here, decoy discrimination is represent...
Ching-Wai Tan, David T. Jones
AMOST
2007
ACM
14 years 1 months ago
Using LTL rewriting to improve the performance of model-checker based test-case generation
Model-checkers have recently been suggested for automated software test-case generation. Several works have presented methods that create efficient test-suites using model-checker...
Gordon Fraser, Franz Wotawa
IPM
2006
108views more  IPM 2006»
13 years 9 months ago
Using searcher simulations to redesign a polyrepresentative implicit feedback interface
Information seeking is traditionally conducted in environments where search results are represented at the user interface by a minimal amount of meta-information such as titles an...
Ryen W. White
ICMLA
2010
13 years 7 months ago
Smoothing Gene Expression Using Biological Networks
Gene expression (microarray) data have been used widely in bioinformatics. The expression data of a large number of genes from small numbers of subjects are used to identify inform...
Yue Fan, Mark A. Kon, Shinuk Kim, Charles DeLisi