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» The method of combinatorial telescoping
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RECOMB
2005
Springer
14 years 8 months ago
Combinatorial Genetic Regulatory Network Analysis Tools for High Throughput Transcriptomic Data
: A series of genome-scale algorithms and high-performance implementations is described and shown to be useful in the genetic analysis of gene transcription. With them it is possib...
Elissa J. Chesler, Michael A. Langston
AEI
2008
108views more  AEI 2008»
13 years 8 months ago
Combinatorial synthesis approach employing graph networks
The paper proposes a methodology to assist the designer at the initial stages of the design synthesis process by enabling him/her to employ knowledge and algorithms existing in gr...
Offer Shai, Noel Titus, Karthik Ramani
COMPGEOM
2003
ACM
14 years 1 months ago
The smallest enclosing ball of balls: combinatorial structure and algorithms
We develop algorithms for computing the smallest enclosing ball of a set of n balls in d-dimensional space. Unlike previous methods, we explicitly address small cases (n ≤ d + 1...
Kaspar Fischer, Bernd Gärtner
BMCBI
2006
122views more  BMCBI 2006»
13 years 8 months ago
A domain-oriented approach to the reduction of combinatorial complexity in signal transduction networks
Background:Receptors and scaffold proteins possess a number of distinct domains and bind multiple partners. A common problem in modeling signaling systems arises from a combinator...
Holger Conzelmann, Julio Saez-Rodriguez, Thomas Sa...
FOCM
2010
140views more  FOCM 2010»
13 years 7 months ago
Combinatorial Sublinear-Time Fourier Algorithms
We study the problem of estimating the best k term Fourier representation for a given frequency-sparse signal (i.e., vector) A of length N k. More explicitly, we investigate how t...
Mark A. Iwen