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RECOMB
2010
Springer
14 years 3 months ago
SubMAP: Aligning Metabolic Pathways with Subnetwork Mappings
Abstract. We consider the problem of aligning two metabolic pathways. Unlike traditional approaches, we do not restrict the alignment to one-to-one mappings between the molecules o...
Ferhat Ay, Tamer Kahveci
CIKM
2009
Springer
14 years 2 months ago
Answering XML queries using materialized views revisited
Answering queries using views is a well-established technique in databases. In this context, two outstanding problems can be formulated. The first one consists in deciding whethe...
Xiaoying Wu, Dimitri Theodoratos, Wendy Hui Wang
SIGCOMM
1998
ACM
14 years 2 months ago
An Active Service Framework and Its Application to Real-Time Multimedia Transcoding
Several recent proposals for an “active networks” architecture advocate the placement of user-defined computation within the network as a key mechanism to enable a wide range...
Elan Amir, Steven McCanne, Randy H. Katz
CSR
2006
Springer
14 years 1 months ago
Fast Motif Search in Protein Sequence Databases
Regular expression pattern matching is widely used in computational biology. Searching through a database of sequences for a motif (a simple regular expression), or its variations...
Elena Zheleva, Abdullah N. Arslan
APSEC
2001
IEEE
14 years 1 months ago
Orchestrating Computations on the World-Wide Web
Word processing software, email, and spreadsheet have revolutionized office activities. There are many other office tasks that are amenable to automation, such as: scheduling a vi...
Jayadev Misra, Harrick M. Vin