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BMCBI
2010
109views more  BMCBI 2010»
13 years 7 months ago
Structural alphabets derived from attractors in conformational space
Background: The hierarchical and partially redundant nature of protein structures justifies the definition of frequently occurring conformations of short fragments as `states'...
Alessandro Pandini, Arianna Fornili, Jens Kleinjun...
HT
2003
ACM
14 years 26 days ago
The connectivity sonar: detecting site functionality by structural patterns
Web sites today serve many different functions, such as corporate sites, search engines, e-stores, and so forth. As sites are created for different purposes, their structure and...
Einat Amitay, David Carmel, Adam Darlow, Ronny Lem...
JCAM
2011
78views more  JCAM 2011»
12 years 10 months ago
Symmetric box-splines on root lattices
Root lattices are efficient sampling lattices for reconstructing isotropic signals in arbitrary dimensions, due to their highly symmetric structure. One root lattice, the Cartesia...
Minho Kim, Jörg Peters
RECOMB
2010
Springer
14 years 2 months ago
Dense Subgraphs with Restrictions and Applications to Gene Annotation Graphs
Abstract. In this paper, we focus on finding complex annotation patterns representing novel and interesting hypotheses from gene annotation data. We define a generalization of th...
Barna Saha, Allison Hoch, Samir Khuller, Louiqa Ra...
ICDE
2006
IEEE
222views Database» more  ICDE 2006»
14 years 9 months ago
CLAN: An Algorithm for Mining Closed Cliques from Large Dense Graph Databases
Most previously proposed frequent graph mining algorithms are intended to find the complete set of all frequent, closed subgraphs. However, in many cases only a subset of the freq...
Jianyong Wang, Zhiping Zeng, Lizhu Zhou