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BMCBI
2005
87views more  BMCBI 2005»
15 years 4 months ago
Efficient decoding algorithms for generalized hidden Markov model gene finders
Background: The Generalized Hidden Markov Model (GHMM) has proven a useful framework for the task of computational gene prediction in eukaryotic genomes, due to its flexibility an...
William H. Majoros, Mihaela Pertea, Arthur L. Delc...
RT
2001
Springer
15 years 8 months ago
A Perceptually-Based Texture Caching Algorithm for Hardware-Based Rendering
: The performance of hardware-based interactive rendering systems is often constrained by polygon fill rates and texture map capacity, rather than polygon count alone. We present a...
Reynald Dumont, Fabio Pellacini, James A. Ferwerda
PPOPP
2010
ACM
15 years 11 months ago
An adaptive performance modeling tool for GPU architectures
This paper presents an analytical model to predict the performance of general-purpose applications on a GPU architecture. The model is designed to provide performance information ...
Sara S. Baghsorkhi, Matthieu Delahaye, Sanjay J. P...
ICFP
2007
ACM
16 years 4 months ago
Feedback directed implicit parallelism
In this paper we present an automated way of using spare CPU resources within a shared memory multi-processor or multi-core machine. Our approach is (i) to profile the execution o...
Tim Harris, Satnam Singh
ECCB
2005
IEEE
15 years 10 months ago
A query language for biological networks
Many areas of modern biology are concerned with the management, storage, visualization, comparison, and analysis of networks. For instance, networks are used to model signal trans...
Ulf Leser