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» Theoretical and Experimental DNA Computation
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MST
2010
146views more  MST 2010»
13 years 1 months ago
The Cache-Oblivious Gaussian Elimination Paradigm: Theoretical Framework, Parallelization and Experimental Evaluation
We consider triply-nested loops of the type that occur in the standard Gaussian elimination algorithm, which we denote by GEP (or the Gaussian Elimination Paradigm). We present tw...
Rezaul Alam Chowdhury, Vijaya Ramachandran
ISBMS
2010
Springer
13 years 11 months ago
A Theoretical Model for RF Ablation of Kidney Tissue and Its Experimental Validation
Radio-frequency (RF) ablation is a minimal invasive thermal therapy, currently considered as an alternative to surgery to eradicate small solid kidney tumors. Our aim is to underst...
Mihaela Pop, Sean R. H. Davidson, Mark Gertner, Mi...
ACTA
2007
126views more  ACTA 2007»
13 years 6 months ago
The syntactic monoid of hairpin-free languages
The study of hairpin-free words has been initiated in the context of DNA computing. DNA strands that, theoretically speaking, are finite strings over the alphabet {A, G, C, T} are...
Lila Kari, Kalpana Mahalingam, Gabriel Thierrin
IPPS
2003
IEEE
13 years 12 months ago
Addressable Procedures for Logic and Arithmetic Operations with DNA Strands
In this paper, we consider addressable procedures with DNA strands for logic and arithmetic operations. Using a theoretical model for DNA computing, we first show a DNA represent...
Akihiro Fujiwara, Ken-ichi Matsumoto, Wei Chen
DNA
2005
Springer
154views Bioinformatics» more  DNA 2005»
14 years 7 days ago
Design of Autonomous DNA Cellular Automata
Recent experimental progress in DNA lattice construction, DNA robotics, and DNA computing provides the basis for designing DNA cellular computing devices, i.e. autonomous nano-mech...
Peng Yin, Sudheer Sahu, Andrew J. Turberfield, Joh...