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» Three Improvements to the BLASTP Search of Genome Databases
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BIRTHDAY
2010
Springer
14 years 23 days ago
Indexing and Searching a Mass Spectrometry Database
Abstract. Database preprocessing in order to create an index often permits considerable speedup in search compared to the iterated query of an unprocessed database. In this paper w...
Søren Besenbacher, Benno Schwikowski, Jens ...
KDD
2007
ACM
184views Data Mining» more  KDD 2007»
14 years 8 months ago
Correlation search in graph databases
Correlation mining has gained great success in many application domains for its ability to capture the underlying dependency between objects. However, the research of correlation ...
Yiping Ke, James Cheng, Wilfred Ng
BMCBI
2006
172views more  BMCBI 2006»
13 years 7 months ago
A novel scoring schema for peptide identification by searching protein sequence databases using tandem mass spectrometry data
Background: Tandem mass spectrometry (MS/MS) is a powerful tool for protein identification. Although great efforts have been made in scoring the correlation between tandem mass sp...
Zhuo Zhang, Shiwei Sun, Xiaopeng Zhu, Suhua Chang,...
BMCBI
2006
108views more  BMCBI 2006»
13 years 7 months ago
SPIDer: Saccharomyces protein-protein interaction database
Background: Since proteins perform their functions by interacting with one another and with other biomolecules, reconstructing a map of the protein-protein interactions of a cell,...
Xiaomei Wu, Lei Zhu, Jie Guo, Cong Fu, Hongjun Zho...
GIS
2010
ACM
13 years 6 months ago
Supporting location-based approximate-keyword queries
Many Web sites support keyword search on their spatial data, such as business listings and photos. In these systems, inconsistencies and errors can exist in both queries and the d...
Sattam Alsubaiee, Alexander Behm, Chen Li