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BMCBI
2011
12 years 11 months ago
PeakRanger: A cloud-enabled peak caller for ChIP-seq data
Background: Chromatin immunoprecipitation (ChIP), coupled with massively parallel short-read sequencing (seq) is used to probe chromatin dynamics. Although there are many algorith...
Xin Feng, Robert Grossman, Lincoln Stein
CVIU
2011
12 years 11 months ago
Markerless reconstruction and synthesis of dynamic facial expressions
In this paper we combine methods from the field of computer vision with surface editing techniques to generate animated faces, which are all in full correspondence to each other....
Dominik Sibbing, Martin Habbecke, Leif Kobbelt
EUROSYS
2011
ACM
12 years 11 months ago
SRM-buffer: an OS buffer management technique to prevent last level cache from thrashing in multicores
Buffer caches in operating systems keep active file blocks in memory to reduce disk accesses. Related studies have been focused on how to minimize buffer misses and the caused pe...
Xiaoning Ding, Kaibo Wang, Xiaodong Zhang
APPROX
2011
Springer
197views Algorithms» more  APPROX 2011»
12 years 7 months ago
Periodicity and Cyclic Shifts via Linear Sketches
We consider the problem of identifying periodic trends in data streams. We say a signal a ∈ Rn is p-periodic if ai = ai+p for all i ∈ [n − p]. Recently, Erg¨un et al. [4] pr...
Michael S. Crouch, Andrew McGregor
PLDI
2012
ACM
11 years 10 months ago
Effective parallelization of loops in the presence of I/O operations
Software-based thread-level parallelization has been widely studied for exploiting data parallelism in purely computational loops to improve program performance on multiprocessors...
Min Feng, Rajiv Gupta, Iulian Neamtiu