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» To Parallelize or Not to Parallelize, Speed Up Issue
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IPPS
1999
IEEE
13 years 11 months ago
Cascaded Execution: Speeding Up Unparallelized Execution on Shared-Memory Multiprocessors
Both inherently sequential code and limitations of analysis techniques prevent full parallelization of many applications by parallelizing compilers. Amdahl's Law tells us tha...
Ruth E. Anderson, Thu D. Nguyen, John Zahorjan
BMCBI
2008
89views more  BMCBI 2008»
13 years 7 months ago
R/parallel - speeding up bioinformatics analysis with R
Background: R is the preferred tool for statistical analysis of many bioinformaticians due in part to the increasing number of freely available analytical methods. Such methods ca...
Gonzalo Vera, Ritsert C. Jansen, Remo Suppi
GECCO
2010
Springer
157views Optimization» more  GECCO 2010»
13 years 10 months ago
Speeding up the evaluation of evolutionary learning systems using GPGPUs
In this paper we introduce a method for computing fitness in evolutionary learning systems based on NVIDIA’s massive parallel technology using the CUDA library. Both the match ...
María A. Franco, Natalio Krasnogor, Jaume B...
RIVF
2008
13 years 8 months ago
Speeding up subset seed algorithm for intensive protein sequence comparison
Abstract--Sequence similarity search is a common and repeated task in molecular biology. The rapid growth of genomic databases leads to the need of speeding up the treatment of thi...
Van Hoa Nguyen, Dominique Lavenier
IPPS
2006
IEEE
14 years 1 months ago
Speeding up NGB with distributed file streaming framework
Grid computing provides a very rich environment for scientific calculations. In addition to the challenges it provides, it also offers new opportunities for optimization. In this ...
Bingchen Li, Kang Chen, Zhiteng Huang, H. L. Rajic...