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» Tools for creating portable demonstration programs
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BMCBI
2010
109views more  BMCBI 2010»
13 years 8 months ago
Pripper: prediction of caspase cleavage sites from whole proteomes
Background: Caspases are a family of proteases that have central functions in programmed cell death (apoptosis) and inflammation. Caspases mediate their effects through aspartate-...
Mirva Piippo, Niina Lietzén, Olli Nevalaine...
BMCBI
2006
180views more  BMCBI 2006»
13 years 8 months ago
The Gaggle: An open-source software system for integrating bioinformatics software and data sources
Background: Systems biologists work with many kinds of data, from many different sources, using a variety of software tools. Each of these tools typically excels at one type of an...
Paul T. Shannon, David J. Reiss, Richard Bonneau, ...
ASPDAC
2005
ACM
97views Hardware» more  ASPDAC 2005»
14 years 2 months ago
Opportunities and challenges for better than worst-case design
The progressive trend of fabrication technologies towards the nanometer regime has created a number of new physical design challenges for computer architects. Design complexity, u...
Todd M. Austin, Valeria Bertacco, David Blaauw, Tr...
SIGSOFT
2007
ACM
14 years 9 months ago
Recovering and using use-case-diagram-to-source-code traceability links
Use case diagrams (UCDs) are widely used to describe requirements and desired functionality of software products. However, UCDs are loosely linked to source code, and maintaining ...
Mark Grechanik, Kathryn S. McKinley, Dewayne E. Pe...
SIGMOD
2010
ACM
255views Database» more  SIGMOD 2010»
14 years 1 months ago
Large graph processing in the cloud
As the study of graphs, such as web and social graphs, becomes increasingly popular, the requirements of efficiency and programming flexibility of large graph processing tasks c...
Rishan Chen, Xuetian Weng, Bingsheng He, Mao Yang