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» TopoGSA: network topological gene set analysis
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BMCBI
2008
140views more  BMCBI 2008»
13 years 9 months ago
FUNYBASE: a FUNgal phYlogenomic dataBASE
Background: The increasing availability of fungal genome sequences provides large numbers of proteins for evolutionary and phylogenetic analyses. However the heterogeneity of data...
Sylvain Marthey, Gabriela Aguileta, Françoi...
PAM
2005
Springer
14 years 2 months ago
Scalable Coordination Techniques for Distributed Network Monitoring
Abstract. Emerging network monitoring infrastructures capture packetlevel traces or keep per-flow statistics at a set of distributed vantage points. Today, distributed monitors in...
Manish R. Sharma, John W. Byers
BMCBI
2008
111views more  BMCBI 2008»
13 years 9 months ago
A perl package and an alignment tool for phylogenetic networks
Background: Phylogenetic networks are a generalization of phylogenetic trees that allow for the representation of evolutionary events acting at the population level, like recombin...
Gabriel Cardona, Francesc Rosselló, Gabriel...
PR
2007
88views more  PR 2007»
13 years 8 months ago
Robust kernel Isomap
Isomap is one of widely-used low-dimensional embedding methods, where geodesic distances on a weighted graph are incorporated with the classical scaling (metric multidimensional s...
Heeyoul Choi, Seungjin Choi
BMCBI
2010
240views more  BMCBI 2010»
13 years 9 months ago
CircuitsDB: a database of mixed microRNA/transcription factor feed-forward regulatory circuits in human and mouse
Background: Transcription Factors (TFs) and microRNAs (miRNAs) are key players for gene expression regulation in higher eukaryotes. In the last years, a large amount of bioinforma...
Olivier Friard, Angela Re, Daniela Taverna, Michel...