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BMCBI
2010
143views more  BMCBI 2010»
13 years 7 months ago
Learning gene regulatory networks from only positive and unlabeled data
Background: Recently, supervised learning methods have been exploited to reconstruct gene regulatory networks from gene expression data. The reconstruction of a network is modeled...
Luigi Cerulo, Charles Elkan, Michele Ceccarelli
JBI
2004
163views Bioinformatics» more  JBI 2004»
13 years 9 months ago
Artificial Chemistries and Metabolic Pathways
Metabolism can be regarded as a network of biochemical reactions, connected via their substrates and products. A metabolic pathway is thus a coordinated series of reactions, and i...
Liliana Félix, Francesc Rosselló, Ga...
PRL
2008
81views more  PRL 2008»
13 years 7 months ago
Selecting and constructing features using grammatical evolution
A novel method for feature selection and construction is introduced. The method improves the classification accuracy, utilizing the well-established technique of grammatical evolu...
Dimitris Gavrilis, Ioannis G. Tsoulos, Evangelos D...
CEC
2005
IEEE
14 years 1 months ago
Clustering-based approach to identify solutions for the inference of regulatory networks
Abstract- In this paper we address the problem of finding valid solutions for the problem of inferring gene regulatory networks. Different approaches to directly infer the depende...
Christian Spieth, Felix Streichert, Nora Speer, An...
BMCBI
2010
152views more  BMCBI 2010»
13 years 7 months ago
Comparative study of three commonly used continuous deterministic methods for modeling gene regulation networks
Background: A gene-regulatory network (GRN) refers to DNA segments that interact through their RNA and protein products and thereby govern the rates at which genes are transcribed...
Martin T. Swain, Johannes J. Mandel, Werner Dubitz...