Background: Flux coupling analysis (FCA) is a useful method for finding dependencies between fluxes of a metabolic network at steady-state. FCA classifies reactions into subsets (...
Backpropagation, similar to most learning algorithms that can form complex decision surfaces, is prone to overfitting. This work presents classification-based objective functions, ...
In this paper we present an evolutionary approach for inferring the structure and dynamics in gene circuits from observed expression kinetics. For representing the regulatory inte...
Biomedical ontologies provide a commonly accepted scheme for the characterization of biological concepts that enable knowledge sharing and integration. Updating and maintaining an ...
On the Internet, users often encounter noise in the form of spelling errors or unknown words, however, dishonest, unreliable, or biased information also acts as noise that makes i...
Koji Murakami, Eric Nichols, Junta Mizuno, Yotaro ...