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BMCBI
2011
12 years 11 months ago
FFCA: a feasibility-based method for flux coupling analysis of metabolic networks
Background: Flux coupling analysis (FCA) is a useful method for finding dependencies between fluxes of a metabolic network at steady-state. FCA classifies reactions into subsets (...
László Dávid, Sayed-Amir Mara...
ML
2006
ACM
110views Machine Learning» more  ML 2006»
13 years 7 months ago
Classification-based objective functions
Backpropagation, similar to most learning algorithms that can form complex decision surfaces, is prone to overfitting. This work presents classification-based objective functions, ...
Michael Rimer, Tony Martinez
GECCO
2006
Springer
202views Optimization» more  GECCO 2006»
13 years 11 months ago
Inference of genetic networks using S-system: information criteria for model selection
In this paper we present an evolutionary approach for inferring the structure and dynamics in gene circuits from observed expression kinetics. For representing the regulatory inte...
Nasimul Noman, Hitoshi Iba
IWANN
2009
Springer
14 years 2 months ago
Identifying Gene Ontology Areas for Automated Enrichment
Biomedical ontologies provide a commonly accepted scheme for the characterization of biological concepts that enable knowledge sharing and integration. Updating and maintaining an ...
Catia Pesquita, Tiago Grego, Francisco M. Couto
AND
2010
13 years 5 months ago
Statement map: reducing web information credibility noise through opinion classification
On the Internet, users often encounter noise in the form of spelling errors or unknown words, however, dishonest, unreliable, or biased information also acts as noise that makes i...
Koji Murakami, Eric Nichols, Junta Mizuno, Yotaro ...