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» Toward Verified Biological Models
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VMCAI
2004
Springer
14 years 3 months ago
A Grand Challenge for Computing: Towards Full Reactive Modeling of a Multi-cellular Animal
Biological systems can be modeled beneficially as reactive systems, using languages and tools developed for the construction of man-made systems. Our long-term aim is to model a f...
David Harel
APBC
2003
13 years 11 months ago
Towards Transparent Access to Multiple Biological Databanks
Nowadays, biologists use a number of large biological databanks to find relevant information for their research. Users of these databanks face a number of problems. One problem i...
Patrick Lambrix, Vaida Jakoniene
COMPGEOM
2007
ACM
14 years 1 months ago
Computing the exact arrangement of circles on a sphere, with applications in structural biology: video
The Bentley-Ottmann (BO) algorithm, initially designed to report the intersection points of line-segments in the plane, is the prototypical sweep-line algorithm. This video presen...
Frédéric Cazals, Sébastien Lo...
CMSB
2004
Springer
14 years 3 months ago
Combining State-Based and Scenario-Based Approaches in Modeling Biological Systems
Biological systems have recently been shown to share many of the properties of reactive systems. This observation has led to the idea of using methods devised for the construction ...
Jasmin Fisher, David Harel, E. Jane Albert Hubbard...
ENTCS
2007
91views more  ENTCS 2007»
13 years 9 months ago
Timed Concurrent Constraint Programming for Analysing Biological Systems
In this paper we present our rst approach to model and verify biological systems using ntcc, a concurrent constraint process calculus. We argue that the partial information const...
Julian Gutierrez, Jorge A. Pérez, Camilo Ru...