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BMCBI
2010
106views more  BMCBI 2010»
13 years 9 months ago
Predicting MHC class I epitopes in large datasets
Background: Experimental screening of large sets of peptides with respect to their MHC binding capabilities is still very demanding due to the large number of possible peptide seq...
Kirsten Roomp, Iris Antes, Thomas Lengauer
BMCBI
2010
86views more  BMCBI 2010»
13 years 9 months ago
Reaction graph kernels predict EC numbers of unknown enzymatic reactions in plant secondary metabolism
Background: Understanding of secondary metabolic pathway in plant is essential for finding druggable candidate enzymes. However, there are many enzymes whose functions are not yet...
Hiroto Saigo, Masahiro Hattori, Hisashi Kashima, K...
BMCBI
2010
151views more  BMCBI 2010»
13 years 9 months ago
TF-finder: A software package for identifying transcription factors involved in biological processes using microarray data and e
Background: Identification of transcription factors (TFs) involved in a biological process is the first step towards a better understanding of the underlying regulatory mechanisms...
Xiaoqi Cui, Tong Wang, Huann-Sheng Chen, Victor Bu...
BMCBI
2006
152views more  BMCBI 2006»
13 years 9 months ago
A two-stage approach for improved prediction of residue contact maps
Background: Protein topology representations such as residue contact maps are an important intermediate step towards ab initio prediction of protein structure. Although improvemen...
Alessandro Vullo, Ian Walsh, Gianluca Pollastri
CN
2007
133views more  CN 2007»
13 years 9 months ago
Automatic high-performance reconstruction and recovery
Self-protecting systems require the ability to instantaneously detect malicious activity at run-time and prevent execution. We argue that it is impossible to perfectly self-protec...
Ashvin Goel, Wu-chang Feng, Wu-chi Feng, David Mai...