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BMCBI
2008
145views more  BMCBI 2008»
13 years 7 months ago
The contrasting properties of conservation and correlated phylogeny in protein functional residue prediction
Background: Amino acids responsible for structure, core function or specificity may be inferred from multiple protein sequence alignments where a limited set of residue types are ...
Jonathan R. Manning, Emily R. Jefferson, Geoffrey ...
SEMWEB
2004
Springer
14 years 27 days ago
Structure-Based Partitioning of Large Concept Hierarchies
Abstract. The increasing awareness of the benefits of ontologies for information processing has lead to the creation of a number of large ontologies about real world domains. The ...
Heiner Stuckenschmidt, Michel C. A. Klein
BMCBI
2006
144views more  BMCBI 2006»
13 years 7 months ago
Association algorithm to mine the rules that govern enzyme definition and to classify protein sequences
Background: The number of sequences compiled in many genome projects is growing exponentially, but most of them have not been characterized experimentally. An automatic annotation...
Shih-Hau Chiu, Chien-Chi Chen, Gwo-Fang Yuan, Thy-...
KDD
2003
ACM
142views Data Mining» more  KDD 2003»
14 years 8 months ago
Frequent-subsequence-based prediction of outer membrane proteins
A number of medically important disease-causing bacteria (collectively called Gram-negative bacteria) are noted for the extra "outer" membrane that surrounds their cell....
Rong She, Fei Chen 0002, Ke Wang, Martin Ester, Je...
ICDM
2002
IEEE
123views Data Mining» more  ICDM 2002»
14 years 15 days ago
Towards Automatic Generation of Query Taxonomy: A Hierarchical Query Clustering Approach
Previous works on automatic query clustering most generate a flat, un-nested partition of query terms. In this work, we are pursuing to organize query terms into a hierarchical s...
Shui-Lung Chuang, Lee-Feng Chien