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» Towards knowledge-based gene expression data mining
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PVLDB
2008
163views more  PVLDB 2008»
13 years 8 months ago
C-DEM: a multi-modal query system for Drosophila Embryo databases
The amount of biological data publicly available has experienced an exponential growth as the technology advances. Online databases are now playing an important role as informatio...
Fan Guo, Lei Li, Christos Faloutsos, Eric P. Xing
BMCBI
2010
154views more  BMCBI 2010»
13 years 6 months ago
Knowledge-based matrix factorization temporally resolves the cellular responses to IL-6 stimulation
Background: External stimulations of cells by hormones, cytokines or growth factors activate signal transduction pathways that subsequently induce a re-arrangement of cellular gen...
Andreas Kowarsch, Florian Blöchl, Sebastian B...
HIS
2008
13 years 10 months ago
CBR System for Diagnosis of Patients
Microarray technology allows to measure the expression levels of thousands of genes in an experiment. The use of computational methods is fundamental in cancer research. One of th...
Juan Francisco de Paz, Sara Rodríguez, Javi...
NAR
2006
170views more  NAR 2006»
13 years 8 months ago
The UCSC Genome Browser Database: update 2006
The University of California Santa Cruz Genome Browser Database (GBD) contains sequence and annotation data for the genomes of about a dozen vertebrate species and several major m...
Angela S. Hinrichs, Donna Karolchik, Robert Baerts...
CADE
2006
Springer
14 years 9 months ago
CEL - A Polynomial-Time Reasoner for Life Science Ontologies
CEL (Classifier for EL) is a reasoner for the small description logic EL+ which can be used to compute the subsumption hierarchy induced by EL+ ontologies. The most distinguishing ...
Franz Baader, Carsten Lutz, Boontawee Suntisrivara...