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» Type Systems for Distributed Data Structures
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ISMB
2007
13 years 10 months ago
A Chado case study: an ontology-based modular schema for representing genome-associated biological information
Motivation: A few years ago, FlyBase undertook to design a new database schema to store Drosophila data. It would fully integrate genomic sequence and annotation data with bibliog...
Chris Mungall, David B. Emmert
BMCBI
2005
131views more  BMCBI 2005»
13 years 7 months ago
Critical evaluation of the JDO API for the persistence and portability requirements of complex biological databases
Background: Complex biological database systems have become key computational tools used daily by scientists and researchers. Many of these systems must be capable of executing on...
Marko Srdanovic, Ulf Schenk, Michael Schwieger, Fa...
21
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CIKM
2009
Springer
14 years 2 months ago
Personalized social search based on the user's social network
This work investigates personalized social search based on the user’s social relations – search results are re-ranked according to their relations with individuals in the user...
David Carmel, Naama Zwerdling, Ido Guy, Shila Ofek...
SIGMOD
2010
ACM
255views Database» more  SIGMOD 2010»
14 years 13 days ago
Large graph processing in the cloud
As the study of graphs, such as web and social graphs, becomes increasingly popular, the requirements of efficiency and programming flexibility of large graph processing tasks c...
Rishan Chen, Xuetian Weng, Bingsheng He, Mao Yang
CIKM
2010
Springer
13 years 6 months ago
Fast and accurate estimation of shortest paths in large graphs
Computing shortest paths between two given nodes is a fundamental operation over graphs, but known to be nontrivial over large disk-resident instances of graph data. While a numbe...
Andrey Gubichev, Srikanta J. Bedathur, Stephan Seu...