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» Types for describing coordinated data structures
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RECOMB
2010
Springer
13 years 6 months ago
Predicting Nucleosome Positioning Using Multiple Evidence Tracks
Abstract. We describe a probabilistic model, implemented as a dynamic Bayesian network, that can be used to predict nucleosome positioning along a chromosome based on one or more g...
Sheila M. Reynolds, Zhiping Weng, Jeff A. Bilmes, ...
PVLDB
2010
118views more  PVLDB 2010»
13 years 6 months ago
Global Detection of Complex Copying Relationships Between Sources
Web technologies have enabled data sharing between sources but also simplified copying (and often publishing without proper attribution). The copying relationships can be complex...
Xin Dong, Laure Berti-Equille, Yifan Hu, Divesh Sr...
BMCBI
2010
143views more  BMCBI 2010»
13 years 7 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...
ASPLOS
1996
ACM
13 years 11 months ago
Shasta: A Low Overhead, Software-Only Approach for Supporting Fine-Grain Shared Memory
This paper describes Shasta, a system that supports a shared address space in software on clusters of computers with physically distributed memory. A unique aspect of Shasta compa...
Daniel J. Scales, Kourosh Gharachorloo, Chandramoh...
ICFP
2008
ACM
14 years 7 months ago
Quotient lenses
There are now a number of bidirectional programming languages, where every program can be read both as a forward transformation mapping one data structure to another and as a reve...
J. Nathan Foster, Alexandre Pilkiewicz, Benjamin C...