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BMCBI
2008
140views more  BMCBI 2008»
13 years 7 months ago
GORouter: an RDF model for providing semantic query and inference services for Gene Ontology and its associations
Background: The most renowned biological ontology, Gene Ontology (GO) is widely used for annotations of genes and gene products of different organisms. However, there are shortcom...
Qingwei Xu, Yixiang Shi, Qiang Lu, Guo-qing Zhang,...
WWW
2004
ACM
14 years 8 months ago
Semantic web applications to e-science in silico experiments
This paper explains our research and implementations of manual, automatic and deep annotations of provenance logs for e-Science in silico experiments. Compared to annotating gener...
Jun Zhao, Carole A. Goble, Robert Stevens
SEMWEB
2005
Springer
14 years 25 days ago
Rapid Benchmarking for Semantic Web Knowledge Base Systems
Abstract. We present a method for rapid development of benchmarks for Semantic Web knowledge base systems. At the core, we have a synthetic data generation approach for OWL that is...
Sui-Yu Wang, Yuanbo Guo, Abir Qasem, Jeff Heflin
WEBI
2010
Springer
13 years 5 months ago
A Scalable Indexing Mechanism for Ontology-Based Information Integration
In recent years, there has been an explosion of publicly available RDF and OWL web pages. Some of these pages are static text files, while others are dynamically generated from la...
Yingjie Li, Abir Qasem, Jeff Heflin
ESCIENCE
2007
IEEE
13 years 11 months ago
Storing and Querying Scientific Workflow Provenance Metadata Using an RDBMS
Provenance management has become increasingly important to support scientific discovery reproducibility, result interpretation, and problem diagnosis in scientific workflow enviro...
Artem Chebotko, Xubo Fei, Cui Lin, Shiyong Lu, Far...