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BMCBI
2010
107views more  BMCBI 2010»
13 years 7 months ago
Detection of characteristic sub pathway network for angiogenesis based on the comprehensive pathway network
Background: Pathways in biological system often cooperate with each other to function. Changes of interactions among pathways tightly associate with alterations in the properties ...
Yezhou Huang, Shao Li
DATASCIENCE
2002
53views more  DATASCIENCE 2002»
13 years 7 months ago
An Integrated Receptor Database (IRDB)
Various receptor data were collected, edited and integrated into an Integrated Receptor Database (IRDB). The data stored includes structural data (amino acid sequences, their seco...
Kotoko Nakata, Takako Takai-Igarashi, Tatsuya Naka...
CMSB
2007
Springer
14 years 1 months ago
A Unifying Framework for Modelling and Analysing Biochemical Pathways Using Petri Nets
We give a description of a Petri net-based framework for modelling and analysing biochemical pathways, which unifies the qualitative, stochastic and continuous paradigms. Each per...
David Gilbert, Monika Heiner, Sebastian Lehrack
BMCBI
2005
109views more  BMCBI 2005»
13 years 7 months ago
Automation of gene assignments to metabolic pathways using high-throughput expression data
Background: Accurate assignment of genes to pathways is essential in order to understand the functional role of genes and to map the existing pathways in a given genome. Existing ...
Liviu Popescu, Golan Yona
GG
2004
Springer
14 years 1 months ago
Analysis of Metabolic Pathways by Graph Transformation
Biochemical pathways, such as metabolic, regulatory, and signal transduction pathways, constitute complex networks of functional and physical interactions between molecular species...
Francesc Rosselló, Gabriel Valiente