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    BMCBI
    2011
    234views Artificial Intelligence» more  BMCBI 2011»
    Binding Site Prediction for Protein-Protein Interactions and Novel Motif Discovery using Re-occurring Polypeptide Sequences
    12 years 11 months ago
    Binding Site Prediction for Protein-Protein Interactions and Novel Motif Discovery using Re-occurring Polypeptide Sequences
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    Background: While there are many methods for predicting protein-protein interaction, very few can determine the specific site of interaction on each protein. Characterization of t...
    Adam Amos-Binks, Catalin Patulea, Sylvain Pitre, A...
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    BMCBI
    2011
    254views Artificial Intelligence» more  BMCBI 2011»
    Reconstructing genome-wide regulatory network of E. coli using transcriptome data and predicted transcription factor activities
    12 years 11 months ago
    Reconstructing genome-wide regulatory network of E. coli using transcriptome data and predicted transcription factor activities
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    Background: Gene regulatory networks play essential roles in living organisms to control growth, keep internal metabolism running and respond to external environmental changes. Un...
    Yao Fu, Laura R. Jarboe, Julie A. Dickerson
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    BMCBI
    2011
    211views Artificial Intelligence» more  BMCBI 2011»
    PhyloMap: an algorithm for visualizing relationships of large sequence data sets and its application to the influenza A virus ge
    12 years 11 months ago
    PhyloMap: an algorithm for visualizing relationships of large sequence data sets and its application to the influenza A virus ge
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    Background: Results of phylogenetic analysis are often visualized as phylogenetic trees. Such a tree can typically only include up to a few hundred sequences. When more than a few...
    Jiajie Zhang, Amir Madany Mamlouk, Thomas Martinet...
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    BMCBI
    2011
    256views Artificial Intelligence» more  BMCBI 2011»
    Cell Subset Prediction for Blood Genomic Studies
    12 years 11 months ago
    Cell Subset Prediction for Blood Genomic Studies
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    Background: Genome-wide transcriptional profiling of patient blood samples offers a powerful tool to investigate underlying disease mechanisms and personalized treatment decisions...
    Christopher R. Bolen, Mohamed Uduman, Steven H. Kl...
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    BMCBI
    2011
    223views Artificial Intelligence» more  BMCBI 2011»
    AMDORAP: Non-targeted metabolic profiling based on high-resolution LC-MS
    12 years 11 months ago
    AMDORAP: Non-targeted metabolic profiling based on high-resolution LC-MS
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    Background: Liquid chromatography-mass spectrometry (LC-MS) utilizing the high-resolution power of an orbitrap is an important analytical technique for both metabolomics and prote...
    Hiroki Takahashi, Takuya Morimoto, Naotake Ogasawa...
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