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» Unfolding of Microarray Data
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BMCBI
2006
123views more  BMCBI 2006»
13 years 8 months ago
How to decide? Different methods of calculating gene expression from short oligonucleotide array data will give different result
Background: Short oligonucleotide arrays for transcript profiling have been available for several years. Generally, raw data from these arrays are analysed with the aid of the Mic...
Frank F. Millenaar, John Okyere, Sean T. May, Mart...
JBI
2007
138views Bioinformatics» more  JBI 2007»
13 years 7 months ago
Towards knowledge-based gene expression data mining
ct 10 The field of gene expression data analysis has grown in the past few years from being purely data-centric to integrative, aiming at 11 complementing microarray analysis with...
Riccardo Bellazzi, Blaz Zupan
JMLR
2008
117views more  JMLR 2008»
13 years 7 months ago
Closed Sets for Labeled Data
Closed sets have been proven successful in the context of compacted data representation for association rule learning. However, their use is mainly descriptive, dealing only with ...
Gemma C. Garriga, Petra Kralj, Nada Lavrac
CSB
2003
IEEE
123views Bioinformatics» more  CSB 2003»
14 years 1 months ago
Fourier Harmonic Approach for Visualizing Temporal Patterns of Gene Expression Data
DNA microarray technology provides a broad snapshot of the state of the cell by measuring the expression levels of thousands of genes simultaneously. Visualization techniques can ...
Li Zhang, Aidong Zhang, Murali Ramanathan
PAKDD
2005
ACM
114views Data Mining» more  PAKDD 2005»
14 years 1 months ago
Increasing Classification Accuracy by Combining Adaptive Sampling and Convex Pseudo-Data
The availability of microarray data has enabled several studies on the application of aggregated classifiers for molecular classification. We present a combination of classifier ag...
Chia Huey Ooi, Madhu Chetty