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» Unfolding of Microarray Data
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CSB
2005
IEEE
133views Bioinformatics» more  CSB 2005»
14 years 1 months ago
Biological Pathway Prediction from Multiple Data Sources Using Iterative Bayesian Updating
There is a diversity of functional genomics data, such as gene expression data from microarray experiments, phenotypic data from gene deletion experiments, protein-protein interac...
Corey Powell, Joshua M. Stuart
BIBM
2008
IEEE
108views Bioinformatics» more  BIBM 2008»
14 years 2 months ago
Systematic Evaluation of Scaling Methods for Gene Expression Data
Even after an experimentally prepared gene expression data set has been pre-processed to account for variations in the microarray technology, there may be inconsistencies between ...
Gaurav Pandey, Lakshmi Naarayanan Ramakrishnan, Mi...
ALIFE
2008
13 years 7 months ago
Exploring the Operational Characteristics of Inference Algorithms for Transcriptional Networks by Means of Synthetic Data
The development of structure-learning algorithms for gene regulatory networks depends heavily on the availability of synthetic data sets that contain both the original network and ...
Koenraad Van Leemput, Tim Van den Bulcke, Thomas D...
KDD
2004
ACM
142views Data Mining» more  KDD 2004»
14 years 8 months ago
Meta-classification of Multi-type Cancer Gene Expression Data
Massive publicly available gene expression data consisting of different experimental conditions and microarray platforms introduce new challenges in data mining when integrating m...
Benny Y. M. Fung, Vincent T. Y. Ng
ICDM
2008
IEEE
102views Data Mining» more  ICDM 2008»
14 years 2 months ago
Mining Order-Preserving Submatrices from Data with Repeated Measurements
Order-preserving submatrices (OPSM’s) have been shown useful in capturing concurrent patterns in data when the relative magnitudes of data items are more important than their ab...
Chun Kit Chui, Ben Kao, Kevin Y. Yip, Sau Dan Lee