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» Unfolding of Microarray Data
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BMCBI
2008
102views more  BMCBI 2008»
13 years 8 months ago
Significance analysis of microarray for relative quantitation of LC/MS data in proteomics
Background: Although fold change is a commonly used criterion in quantitative proteomics for differentiating regulated proteins, it does not provide an estimation of false positiv...
Bryan A. P. Roxas, Qingbo Li
BMCBI
2008
115views more  BMCBI 2008»
13 years 8 months ago
Genome-scale cluster analysis of replicated microarrays using shrinkage correlation coefficient
Background: Currently, clustering with some form of correlation coefficient as the gene similarity metric has become a popular method for profiling genomic data. The Pearson corre...
Jianchao Yao, Chunqi Chang, Mari L. Salmi, Yeung S...
BMCBI
2005
108views more  BMCBI 2005»
13 years 8 months ago
Storing, linking, and mining microarray databases using SRS
Background: SRS (Sequence Retrieval System) has proven to be a valuable platform for storing, linking, and querying biological databases. Due to the availability of a broad range ...
Antoine Veldhoven, Don de Lange, Marcel Smid, Vict...
PAKDD
2004
ACM
105views Data Mining» more  PAKDD 2004»
14 years 1 months ago
Extracting and Explaining Biological Knowledge in Microarray Data
Paul J. Kennedy, Simeon J. Simoff, David B. Skilli...
EVOW
2005
Springer
14 years 1 months ago
Evolutionary Biclustering of Microarray Data
In this work, we address the biclustering of gene expression data with evolutionary computation, which has been proven to have excellent performance on complex problems. In express...
Jesús S. Aguilar-Ruiz, Federico Divina