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BMCBI
2008
173views more  BMCBI 2008»
13 years 9 months ago
Extraction of semantic biomedical relations from text using conditional random fields
Background: The increasing amount of published literature in biomedicine represents an immense source of knowledge, which can only efficiently be accessed by a new generation of a...
Markus Bundschus, Mathäus Dejori, Martin Stet...
KDD
2000
ACM
133views Data Mining» more  KDD 2000»
14 years 1 months ago
Data selection for support vector machine classifiers
The problem of extracting a minimal number of data points from a large dataset, in order to generate a support vector machine (SVM) classifier, is formulated as a concave minimiza...
Glenn Fung, Olvi L. Mangasarian
BMCBI
2010
86views more  BMCBI 2010»
13 years 9 months ago
Mining protein loops using a structural alphabet and statistical exceptionality
Background: Protein loops encompass 50% of protein residues in available three-dimensional structures. These regions are often involved in protein functions, e.g. binding site, ca...
Leslie Regad, Juliette Martin, Grégory Nuel...
KDD
2002
ACM
154views Data Mining» more  KDD 2002»
14 years 10 months ago
Mining Protein Contact Maps
The 3D conformation of a protein may be compactly represented in a symmetrical, square, boolean matrix of pairwise, inter-residue contacts, or "contact map". The contact...
Jingjing Hu, Xiaolan Shen, Yu Shao, Chris Bystroff...
LREC
2008
166views Education» more  LREC 2008»
13 years 11 months ago
A lexicon for biology and bioinformatics: the BOOTStrep experience
This paper describes the design, implementation and population of a lexical resource for biology and bioinformatics (the BioLexicon) developed within an ongoing European project. ...
Valeria Quochi, Monica Monachini, Riccardo Del Gra...