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» Using Data Lineage for Sub-image Processing
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BMCBI
2008
130views more  BMCBI 2008»
13 years 11 months ago
A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
Sheila Podell, Terry Gaasterland, Eric E. Allen
BMCBI
2010
208views more  BMCBI 2010»
13 years 11 months ago
Using machine learning to speed up manual image annotation: application to a 3D imaging protocol for measuring single cell gene
Background: Image analysis is an essential component in many biological experiments that study gene expression, cell cycle progression, and protein localization. A protocol for tr...
Zafer Aydin, John I. Murray, Robert H. Waterston, ...
BMCBI
2010
135views more  BMCBI 2010»
13 years 11 months ago
Efficient genome-scale phylogenetic analysis under the duplication-loss and deep coalescence cost models
Background: Genomic data provide a wealth of new information for phylogenetic analysis. Yet making use of this data requires phylogenetic methods that can efficiently analyze extr...
Mukul S. Bansal, J. Gordon Burleigh, Oliver Eulens...
DEBU
2007
211views more  DEBU 2007»
13 years 10 months ago
Provenance in Databases: Past, Current, and Future
The need to understand and manage provenance arises in almost every scientific application. In many cases, information about provenance constitutes the proof of correctness of re...
Wang Chiew Tan
OTM
2009
Springer
14 years 5 months ago
Ontology-Driven Provenance Management in eScience: An Application in Parasite Research
Provenance, from the French word “provenir”, describes the lineage or history of a data entity. Provenance is critical information in scientific applications to verify experime...
Satya Sanket Sahoo, D. Brent Weatherly, Raghava Mu...