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» Using Formal Concept Analysis for Microarray Data Comparison
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CLA
2007
13 years 10 months ago
Precalculating Component Interface Compatibility using FCA
In component-based software engineering, software systems are built by assembling prefabricated reusable components. The compatibility between the assembled components is crucial. ...
Gabriela Arévalo, Nicolas Desnos, Marianne ...
CIKM
2006
Springer
14 years 21 days ago
Concept frequency distribution in biomedical text summarization
Text summarization is a data reduction process. The use of text summarization enables users to reduce the amount of text that must be read while still assimilating the core inform...
Lawrence H. Reeve, Hyoil Han, Saya V. Nagori, Jona...
BMCBI
2010
193views more  BMCBI 2010»
13 years 9 months ago
Probe set filtering increases correlation between Affymetrix GeneChip and qRT-PCR expression measurements
Background: Affymetrix GeneChip microarrays are popular platforms for expression profiling in two types of studies: detection of differential expression computed by p-values of t-...
Jakub Mieczkowski, Magdalena E. Tyburczy, Michal D...
BMCBI
2004
228views more  BMCBI 2004»
13 years 8 months ago
An XML standard for the dissemination of annotated 2D gel electrophoresis data complemented with mass spectrometry results
Background: Many proteomics initiatives require a seamless bioinformatics integration of a range of analytical steps between sample collection and systems modeling immediately ass...
Romesh Stanislaus, Liu Hong Jiang, Martha Swartz, ...
BMCBI
2010
108views more  BMCBI 2010»
13 years 9 months ago
Error, reproducibility and sensitivity : a pipeline for data processing of Agilent oligonucleotide expression arrays
Background: Expression microarrays are increasingly used to obtain large scale transcriptomic information on a wide range of biological samples. Nevertheless, there is still much ...
Benjamin Chain, Helen Bowen, John Hammond, Wilfrie...