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CMSB
2007
Springer
14 years 2 months ago
A Unifying Framework for Modelling and Analysing Biochemical Pathways Using Petri Nets
We give a description of a Petri net-based framework for modelling and analysing biochemical pathways, which unifies the qualitative, stochastic and continuous paradigms. Each per...
David Gilbert, Monika Heiner, Sebastian Lehrack
ESEC
1997
Springer
13 years 12 months ago
A View-Oriented Approach to System Modelling Based on Graph Transformation
The idea of a combined reference model- and view-based specification approach has been proposed recently in the software engineering community. In this paper we present a specifica...
Gregor Engels, Reiko Heckel, Gabriele Taentzer, Ha...
BMCBI
2006
119views more  BMCBI 2006»
13 years 7 months ago
Evaluation of microarray data normalization procedures using spike-in experiments
Background: Recently, a large number of methods for the analysis of microarray data have been proposed but there are few comparisons of their relative performances. By using so-ca...
Patrik Rydén, Henrik Andersson, Mattias Lan...
ADBIS
2009
Springer
143views Database» more  ADBIS 2009»
14 years 2 months ago
Cost-Based Vectorization of Instance-Based Integration Processes
The inefficiency of integration processes—as an abstraction of workflow-based integration tasks—is often reasoned by low resource utilization and significant waiting times f...
Matthias Böhm, Dirk Habich, Steffen Preissler...
CORR
2007
Springer
127views Education» more  CORR 2007»
13 years 7 months ago
Attribute Exploration of Discrete Temporal Transitions
Discrete temporal transitions occur in a variety of domains, but this work is mainly motivated by applications in molecular biology: explaining and analyzing observed transcriptome...
Johannes Wollbold