117 search results - page 17 / 24 » Using Hybrid Alignment for Iterative Sequence Database Searc... |
IPPS
2010
IEEE
13 years 5 months ago
2010
IEEE
Abstract--A hybrid MPI/Pthreads parallelization was implemented in the RAxML phylogenetics code. New MPI code was added to the existing Pthreads production code to exploit parallel...
BMCBI
2010
13 years 5 months ago
2010
Background: Models for the simulation of metabolic networks require the accurate prediction of enzyme function. Based on a genomic sequence, enzymatic functions of gene products a...
BCB
2010
13 years 2 months ago
2010
Many biologically motivated problems are expressed as dynamic programming recurrences and are difficult to parallelize due to the intrinsic data dependencies in their algorithms. ...
BMCBI
2006
13 years 7 months ago
2006
Background: Protein sequence clustering has been widely used as a part of the analysis of protein structure and function. In most cases single linkage or graph-based clustering al...
ISMB
2000
13 years 9 months ago
2000
We have developed a set of methods and tools for automatic discovery of putative regulatory signals in genome sequences. The analysis pipeline consists of gene expression data clu...