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RECOMB
1999
Springer
14 years 4 days ago
Classifying proteins by family using the product of correlated p-values
An important goal in bioinformatics is determining the homology and function of proteins from their sequences. Pairwise sequence similarity algorithms are often employed for this ...
Timothy L. Bailey, William Noble Grundy
BMCBI
2006
128views more  BMCBI 2006»
13 years 8 months ago
Lexical adaptation of link grammar to the biomedical sublanguage: a comparative evaluation of three approaches
Background: We study the adaptation of Link Grammar Parser to the biomedical sublanguage with a focus on domain terms not found in a general parser lexicon. Using two biomedical c...
Sampo Pyysalo, Tapio Salakoski, Sophie Aubin, Adel...
BMCBI
2010
146views more  BMCBI 2010»
13 years 8 months ago
Revealing and avoiding bias in semantic similarity scores for protein pairs
Background: Semantic similarity scores for protein pairs are widely applied in functional genomic researches for finding functional clusters of proteins, predicting protein functi...
Jing Wang 0004, Xianxiao Zhou, Jing Zhu, Chenggui ...
WEBI
2005
Springer
14 years 1 months ago
Integrating Element and Term Semantics for Similarity-Based XML Document Clustering
Structured link vector model (SLVM) is a recently proposed document representation that takes into account both structural and semantic information for measuring XML document simi...
Jianwu Yang, William K. Cheung, Xiaoou Chen
ACL
2006
13 years 9 months ago
Semantic Taxonomy Induction from Heterogenous Evidence
We propose a novel algorithm for inducing semantic taxonomies. Previous algorithms for taxonomy induction have typically focused on independent classifiers for discovering new sin...
Rion Snow, Daniel Jurafsky, Andrew Y. Ng