Abstract. Conceptual Graphs are a very powerful knowledge and meaning representation formalism grounded on deep philosophical, linguistic and object oriented principles [1], [2]. C...
Background: With the expansion of public repositories such as the Gene Expression Omnibus (GEO), we are rapidly cataloging cellular transcriptional responses to diverse experiment...
Jesse M. Engreitz, Alexander A. Morgan, Joel Dudle...
Background: Extensive and automated data integration in bioinformatics facilitates the construction of large, complex biological networks. However, the challenge lies in the inter...
Given their simple nature, the success of keyword based retrieval systems is astonishing. Although these methods seemingly only process words (and their word counts), they rely on...
We address the problem of linking observations from reality to a semantic web based knowledge base. Concepts in the biological domain are increasingly being formalized through ont...