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» Using Multiple Alignments to Improve Gene Prediction
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135
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BMCBI
2010
110views more  BMCBI 2010»
15 years 3 months ago
GenHtr: a tool for comparative assessment of genetic heterogeneity in microbial genomes generated by massive short-read sequenci
Background: Microevolution is the study of short-term changes of alleles within a population and their effects on the phenotype of organisms. The result of the below-species-level...
GongXin Yu
132
Voted
BMCBI
2004
114views more  BMCBI 2004»
15 years 3 months ago
Profiled support vector machines for antisense oligonucleotide efficacy prediction
Background: This paper presents the use of Support Vector Machines (SVMs) for prediction and analysis of antisense oligonucleotide (AO) efficacy. The collected database comprises ...
Gustavo Camps-Valls, Alistair M. Chalk, Antonio J....
130
Voted
BMCBI
2005
75views more  BMCBI 2005»
15 years 3 months ago
Prediction of a common structural scaffold for proteasome lid, COP9-signalosome and eIF3 complexes
Background: The 'lid' subcomplex of the 26S proteasome and the COP9 signalosome (CSN complex) share a common architecture consisting of six subunits harbouring a so-call...
Hartmut Scheel, Kay Hofmann
118
Voted
ISMIR
2005
Springer
171views Music» more  ISMIR 2005»
15 years 9 months ago
Finding Meter in Music Using An Autocorrelation Phase Matrix and Shannon Entropy
This paper introduces a novel way to detect metrical structure in music. We introduce a way to compute autocorrelation such that the distribution of energy in phase space is prese...
Douglas Eck, Norman Casagrande
EUROPAR
2006
Springer
15 years 7 months ago
Hierarchical Model Validation of Symbolic Performance Models of Scientific Kernels
Multi-resolution validation of hierarchical performance models of scientific applications is critical primarily for two reasons. First, the step-by-step validation determines the c...
Sadaf R. Alam, Jeffrey S. Vetter