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» Using Multiple Alignments to Improve Gene Prediction
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BMCBI
2008
100views more  BMCBI 2008»
13 years 8 months ago
Hotspot Hunter: a computational system for large-scale screening and selection of candidate immunological hotspots in pathogen p
Background: T-cell epitopes that promiscuously bind to multiple alleles of a human leukocyte antigen (HLA) supertype are prime targets for development of vaccines and immunotherap...
Guanglan Zhang, Asif M. Khan, Kellathur N. Sriniva...
BIBM
2008
IEEE
175views Bioinformatics» more  BIBM 2008»
14 years 3 months ago
Integrative Protein Function Transfer Using Factor Graphs and Heterogeneous Data Sources
We propose a novel approach for predicting protein functions of an organism by coupling sequence homology and PPI data between two (or more) species with multifunctional Gene Onto...
Antonina Mitrofanova, Vladimir Pavlovic, Bud Mishr...
NAR
2008
101views more  NAR 2008»
13 years 8 months ago
PVS: a web server for protein sequence variability analysis tuned to facilitate conserved epitope discovery
We have developed PVS (Protein Variability Server), a web-based tool that uses several variability metrics to compute the absolute site variability in multiple protein-sequence al...
Maria Garcia-Boronat, Carmen M. Diez-Rivero, Ellis...
PERCOM
2010
ACM
13 years 7 months ago
Predicting mobility events on personal devices
High-end mobile phones are quickly becoming versatile sensing platforms, capable of continuously capturing the dynamic context of their owners through various sensors. A change in...
Arjan J. H. Peddemors, Henk Eertink, Ignas G. Niem...
GLOBECOM
2010
IEEE
13 years 6 months ago
Cache-Based Scalable Deep Packet Inspection with Predictive Automaton
Abstract--Regular expression (Regex) becomes the standard signature language for security and application detection. Deterministic finite automata (DFAs) are widely used to perform...
Yi Tang, Junchen Jiang, Xiaofei Wang, Yi Wang, Bin...