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» Using Multiple Alignments to Improve Gene Prediction
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ISMIS
2003
Springer
14 years 1 months ago
Evolutionary Computation for Optimal Ensemble Classifier in Lymphoma Cancer Classification
Owing to the development of DNA microarray technologies, it is possible to get thousands of expression levels of genes at once. If we make the effective classification system with ...
Chanho Park, Sung-Bae Cho
BMCBI
2008
155views more  BMCBI 2008»
13 years 8 months ago
ComPath: comparative enzyme analysis and annotation in pathway/subsystem contexts
Background: Once a new genome is sequenced, one of the important questions is to determine the presence and absence of biological pathways. Analysis of biological pathways in a ge...
Kwangmin Choi, Sun Kim
BMCBI
2006
120views more  BMCBI 2006»
13 years 8 months ago
Integrating protein structures and precomputed genealogies in the Magnum database: Examples with cellular retinoid binding prote
Background: When accurate models for the divergent evolution of protein sequences are integrated with complementary biological information, such as folded protein structures, anal...
Michael E. Bradley, Steven A. Benner
BIB
2010
129views more  BIB 2010»
13 years 8 months ago
Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology
PathwayTools is a production-quality software environment for creating a type of model-organism database called a Pathway/Genome Database (PGDB). A PGDB such as EcoCyc integrates ...
Peter D. Karp, Suzanne M. Paley, Markus Krummenack...
COLING
2008
13 years 10 months ago
Choosing the Right Translation: A Syntactically Informed Classification Approach
One style of Multi-Engine Machine Translation architecture involves choosing the best of a set of outputs from different systems. Choosing the best translation from an arbitrary s...
Simon Zwarts, Mark Dras