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134
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BIBE
2005
IEEE
15 years 9 months ago
2005
IEEE
We have recently demonstrated (La et al, Proteins, 58:2005) that sequence fragments approximating the overall familial phylogeny, called phylogenetic motifs (PMs), represent a pro...
134
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BMCBI
2006
15 years 3 months ago
2006
Background: Horizontal gene transfer (HGT) has allowed bacteria to evolve many new capabilities. Because transferred genes perform many medically important functions, such as conf...
132
Voted
BMCBI
2006
15 years 3 months ago
2006
Background: Several motif detection algorithms have been developed to discover overrepresented motifs in sets of coexpressed genes. However, in a noisy gene list, the number of ge...
130
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CICLING
2010
Springer
14 years 10 months ago
2010
Springer
Abstract. We present a linguistically-motivated sub-sentential alignment system that extends the intersected IBM Model 4 word alignments. The alignment system is chunk-driven and r...
134
Voted
BMCBI
2005
15 years 3 months ago
2005
Background: High quality sequence alignments of RNA and DNA sequences are an important prerequisite for the comparative analysis of genomic sequence data. Nucleic acid sequences, ...