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» Using Multiple Alignments to Improve Gene Prediction
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BMCBI
2008
173views more  BMCBI 2008»
15 years 3 months ago
Gene Vector Analysis (Geneva): A unified method to detect differentially-regulated gene sets and similar microarray experiments
Background: Microarray experiments measure changes in the expression of thousands of genes. The resulting lists of genes with changes in expression are then searched for biologica...
Stephen W. Tanner, Pankaj Agarwal
127
Voted
BMCBI
2008
193views more  BMCBI 2008»
15 years 3 months ago
Missing value imputation for microarray gene expression data using histone acetylation information
Background: It is an important pre-processing step to accurately estimate missing values in microarray data, because complete datasets are required in numerous expression profile ...
Qian Xiang, Xianhua Dai, Yangyang Deng, Caisheng H...
121
Voted
ICDM
2009
IEEE
165views Data Mining» more  ICDM 2009»
15 years 10 months ago
Cross-Guided Clustering: Transfer of Relevant Supervision across Domains for Improved Clustering
—Lack of supervision in clustering algorithms often leads to clusters that are not useful or interesting to human reviewers. We investigate if supervision can be automatically tr...
Indrajit Bhattacharya, Shantanu Godbole, Sachindra...
130
Voted
BMCBI
2008
113views more  BMCBI 2008»
15 years 3 months ago
Investigating selection on viruses: a statistical alignment approach
Background: Two problems complicate the study of selection in viral genomes: Firstly, the presence of genes in overlapping reading frames implies that selection in one reading fra...
Saskia de Groot, Thomas Mailund, Gerton Lunter, Jo...
ICASSP
2008
IEEE
15 years 10 months ago
Confidence estimation, OOV detection and language ID using phone-to-word transduction and phone-level alignments
Automatic Speech Recognition (ASR) systems continue to make errors during search when handling various phenomena including noise, pronunciation variation, and out of vocabulary (O...
Christopher M. White, Geoffrey Zweig, Lukas Burget...