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» Using Multiple Alignments to Improve Gene Prediction
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139
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BMCBI
2006
86views more  BMCBI 2006»
15 years 3 months ago
MCALIGN2: Faster, accurate global pairwise alignment of non-coding DNA sequences based on explicit models of indel evolution
Background: Non-coding DNA sequences comprise a very large proportion of the total genomic content of mammals, most other vertebrates, many invertebrates, and most plants. Unravel...
Jun Wang, Peter D. Keightley, Toby Johnson
134
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INFOCOM
2010
IEEE
15 years 2 months ago
A General Algorithm for Interference Alignment and Cancellation in Wireless Networks
—Physical layer techniques have come a long way and can achieve close to Shannon capacity for single pointto-point transmissions. It is apparent that, to further improve network ...
Erran L. Li, Richard Alimi, Dawei Shen, Harish Vis...
151
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BIBM
2008
IEEE
125views Bioinformatics» more  BIBM 2008»
15 years 3 months ago
Systems Biology via Redescription and Ontologies (III): Protein Classification Using Malaria Parasite's Temporal Transcriptomic
This paper addresses the protein classification problem, and explores how its accuracy can be improved by using information from time-course gene expression data. The methods are ...
Antonina Mitrofanova, Samantha Kleinberg, Jane Car...
102
Voted
BMCBI
2008
80views more  BMCBI 2008»
15 years 3 months ago
Computational evaluation of TIS annotation for prokaryotic genomes
Background: Accurate annotation of translation initiation sites (TISs) is essential for understanding the translation initiation mechanism. However, the reliability of TIS annotat...
Gang-Qing Hu, Xiaobin Zheng, Li-Ning Ju, Huaiqiu Z...
154
Voted
BMCBI
2004
126views more  BMCBI 2004»
15 years 3 months ago
A probabilistic model for the evolution of RNA structure
Background: For the purposes of finding and aligning noncoding RNA gene- and cis-regulatory elements in multiple-genome datasets, it is useful to be able to derive multi-sequence ...
Ian Holmes