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» Using Multiple Alignments to Improve Gene Prediction
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141
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BMCBI
2008
118views more  BMCBI 2008»
15 years 3 months ago
Evaluation of phylogenetic footprint discovery for predicting bacterial cis-regulatory elements and revealing their evolution
Background: The detection of conserved motifs in promoters of orthologous genes (phylogenetic footprints) has become a common strategy to predict cis-acting regulatory elements. S...
Rekin's Janky, Jacques van Helden
125
Voted
BMCBI
2006
133views more  BMCBI 2006»
15 years 3 months ago
An integrated approach to the prediction of domain-domain interactions
Background: The development of high-throughput technologies has produced several large scale protein interaction data sets for multiple species, and significant efforts have been ...
Hyunju Lee, Minghua Deng, Fengzhu Sun, Ting Chen
138
Voted
NAR
2007
260views more  NAR 2007»
15 years 3 months ago
WoLF PSORT: protein localization predictor
WoLF PSORT is an extension of the PSORT II program for protein subcellular location prediction. WoLF PSORT converts protein amino acid sequences into numerical localization featur...
Paul Horton, Keun-Joon Park, Takeshi Obayashi, Nao...
132
Voted
KDD
2008
ACM
213views Data Mining» more  KDD 2008»
16 years 4 months ago
Heterogeneous data fusion for alzheimer's disease study
Effective diagnosis of Alzheimer's disease (AD) is of primary importance in biomedical research. Recent studies have demonstrated that neuroimaging parameters are sensitive a...
Jieping Ye, Kewei Chen, Teresa Wu, Jing Li, Zheng ...
134
Voted
ACL
2006
15 years 5 months ago
Discriminative Word Alignment with Conditional Random Fields
In this paper we present a novel approach for inducing word alignments from sentence aligned data. We use a Conditional Random Field (CRF), a discriminative model, which is estima...
Phil Blunsom, Trevor Cohn