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» Using OWL to model biological knowledge
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BMCBI
2008
118views more  BMCBI 2008»
13 years 7 months ago
Drug interaction prediction using ontology-driven hypothetical assertion framework for pathway generation followed by numerical
Background: In accordance with the increasing amount of information concerning individual differences in drug response and molecular interaction, the role of in silico prediction ...
Takeshi Arikuma, Sumi Yoshikawa, Ryuzo Azuma, Kent...
AAAI
2008
13 years 10 months ago
Using Answer Set Programming and Lambda Calculus to Characterize Natural Language Sentences with Normatives and Exceptions
One way to solve the knowledge acquisition bottleneck is to have ways to translate natural language sentences and discourses to a formal knowledge representation language, especia...
Chitta Baral, Juraj Dzifcak, Tran Cao Son
BIB
2010
89views more  BIB 2010»
13 years 6 months ago
Knowledge-based data analysis comes of age
The emergence of high-throughput technologies for measuring biological systems has introduced problems for data interpretation that must be addressed for proper inference. First, ...
Michael F. Ochs
BMCBI
2006
145views more  BMCBI 2006»
13 years 7 months ago
GEM System: automatic prototyping of cell-wide metabolic pathway models from genomes
Background: Successful realization of a "systems biology" approach to analyzing cells is a grand challenge for our understanding of life. However, current modeling appro...
Kazuharu Arakawa, Yohei Yamada, Kosaku Shinoda, Yo...
CBMS
2006
IEEE
14 years 1 months ago
An Ontology-Driven Mediator for Querying Time-Oriented Biomedical Data
— Most biomedical research databases contain considerable amounts of time-oriented data. However, temporal knowledge about the contextual meaning of such data is not usually repr...
Martin J. O'Connor, Ravi Shankar, Amar K. Das