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BMCBI
2008
128views more  BMCBI 2008»
13 years 7 months ago
Efficient computation of absent words in genomic sequences
Background: Analysis of sequence composition is a routine task in genome research. Organisms are characterized by their base composition, dinucleotide relative abundance, codon us...
Julia Herold, Stefan Kurtz, Robert Giegerich
ENTCS
2007
113views more  ENTCS 2007»
13 years 7 months ago
Modular Checkpointing for Atomicity
Transient faults that arise in large-scale software systems can often be repaired by re-executing the code in which they occur. Ascribing a meaningful semantics for safe re-execut...
Lukasz Ziarek, Philip Schatz, Suresh Jagannathan
BMCBI
2005
130views more  BMCBI 2005»
13 years 7 months ago
Squid - a simple bioinformatics grid
Background: BLAST is a widely used genetic research tool for analysis of similarity between nucleotide and protein sequences. This paper presents a software application entitled &...
Paulo C. Carvalho, Rafael V. Glória, Antoni...
BMCBI
2011
13 years 2 months ago
pROC: an open-source package for R and S+ to analyze and compare ROC curves
Background: Receiver operating characteristic (ROC) curves are useful tools to evaluate classifiers in biomedical and bioinformatics applications. However, conclusions are often r...
Xavier Robin, Natacha Turck, Alexandre Hainard, Na...
KI
2002
Springer
13 years 7 months ago
Advantages, Opportunities and Limits of Empirical Evaluations: Evaluating Adaptive Systems
While empirical evaluations are a common research method in some areas of Artificial Intelligence (AI), others still neglect this approach. This article outlines both the opportun...
Stephan Weibelzahl, Gerhard Weber