78 search results - page 9 / 16 » Using PQ Trees for Comparative Genomics |
BMCBI
2005
13 years 7 months ago
2005
Background: Microarray experiments, as well as other genomic analyses, often result in large gene sets containing up to several hundred genes. The biological significance of such ...
BMCBI
2010
13 years 7 months ago
2010
Background: Genomic data provide a wealth of new information for phylogenetic analysis. Yet making use of this data requires phylogenetic methods that can efficiently analyze extr...
IJBRA
2006
13 years 7 months ago
2006
: Phylogenetic analysis is a central tool in studies of comparative genomics. When a new region of DNA is isolated and sequenced, researchers are often forced to throw away months ...
FCCM
2011
IEEE
12 years 11 months ago
2011
IEEE
—String matching is a ubiquitous problem that arises in a wide range of applications in computing, e.g., packet routing, intrusion detection, web querying, and genome analysis. D...
ICDE
2004
IEEE
14 years 9 months ago
2004
IEEE
The indexing technique commonly used for long strings, such as genomes, is the suffix tree, which is based on a vertical (intra-path) compaction of the underlying trie structure. ...