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SPAA
1998
ACM
13 years 12 months ago
Fast Set Operations Using Treaps
We present parallel algorithms for union, intersection and difference on ordered sets using random balanced binary trees (treaps [26]). For two sets of size n and m (m ≤ n) the...
Guy E. Blelloch, Margaret Reid-Miller
PPOPP
2012
ACM
12 years 3 months ago
Better speedups using simpler parallel programming for graph connectivity and biconnectivity
Speedups demonstrated for finding the biconnected components of a graph: 9x to 33x on the Explicit Multi-Threading (XMT) many-core computing platform relative to the best serial ...
James A. Edwards, Uzi Vishkin
HICSS
1995
IEEE
109views Biometrics» more  HICSS 1995»
13 years 11 months ago
The architecture of an optimistic CPU: the WarpEngine
The architecture for a shared memory CPU is described. The CPU allows for parallelism down to the level of single instructions and is tolerant of memory latency. All executable in...
John G. Cleary, Murray Pearson, Husam Kinawi
CPHYSICS
2010
135views more  CPHYSICS 2010»
13 years 7 months ago
An events based algorithm for distributing concurrent tasks on multi-core architectures
In this paper, a programming model is presented which enables scalable parallel performance on multi-core shared memory architectures. The model has been developed for application...
David W. Holmes, John R. Williams, Peter Tilke
BIBE
2008
IEEE
272views Bioinformatics» more  BIBE 2008»
14 years 2 months ago
Design and implementation of the Smith-Waterman algorithm on the CUDA-compatible GPU
— This paper describes a design and implementation of the Smith-Waterman algorithm accelerated on the graphics processing unit (GPU). Our method is implemented using compute uni...
Yuma Munekawa, Fumihiko Ino, Kenichi Hagihara