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BIB
2008
106views more  BIB 2008»
13 years 7 months ago
Biodiversity informatics: the challenge of linking data and the role of shared identifiers
A major challenge facing biodiversity informatics is integrating data stored in widely distributed databases. Initial efforts have relied on taxonomic names as the shared identifi...
Roderic D. M. Page
IPPS
2009
IEEE
14 years 2 months ago
Evaluating the use of GPUs in liver image segmentation and HMMER database searches
In this paper we present the results of parallelizing two life sciences applications, Markov random fieldsbased (MRF) liver segmentation and HMMER’s Viterbi algorithm, using GP...
John Paul Walters, Vidyananth Balu, Suryaprakash K...
FGCS
2007
106views more  FGCS 2007»
13 years 7 months ago
A parallel hybrid genetic algorithm for protein structure prediction on the computational grid
Solving the structure prediction problem for complex proteins is difficult and computationally expensive. In this paper, we propose a bicriterion parallel hybrid genetic algorith...
Alexandru-Adrian Tantar, Nouredine Melab, El-Ghaza...
BMCBI
2010
190views more  BMCBI 2010»
13 years 7 months ago
A parallel and incremental algorithm for efficient unique signature discovery on DNA databases
Background: DNA signatures are distinct short nucleotide sequences that provide valuable information that is used for various purposes, such as the design of Polymerase Chain Reac...
Hsiao Ping Lee, Tzu-Fang Sheu, Chuan Yi Tang
ECEASST
2006
305views more  ECEASST 2006»
13 years 7 months ago
The ParMol Package for Frequent Subgraph Mining
Mining for frequent subgraphs in a graph database has become a popular topic in the last years. Algorithms to solve this problem are used in chemoinformatics to find common molecul...
Thorsten Meinl, Marc Wörlein, Olga Urzova, In...