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CIKM
2009
Springer
14 years 3 months ago
An analysis framework for search sequences
In this paper we present a general framework to study sequences of search activities performed by a user. Our framework provides (i) a vocabulary to discuss types of features, mod...
Qiaozhu Mei, Kristina Klinkner, Ravi Kumar, Andrew...
SIGMOD
2009
ACM
161views Database» more  SIGMOD 2009»
14 years 3 months ago
Dependency-aware reordering for parallelizing query optimization in multi-core CPUs
The state of the art commercial query optimizers employ cost-based optimization and exploit dynamic programming (DP) to find the optimal query execution plan (QEP) without evalua...
Wook-Shin Han, Jinsoo Lee
NAR
2008
175views more  NAR 2008»
13 years 8 months ago
Onto-CC: a web server for identifying Gene Ontology conceptual clusters
The Gene Ontology (GO) vocabulary has been extensively explored to analyze the functions of coexpressed genes. However, despite its extended use in Biology and Medical Sciences, t...
Rocío Romero-Záliz, Coral del Val, J...
WOB
2004
120views Bioinformatics» more  WOB 2004»
13 years 10 months ago
Reconfigurable Systems for Sequence Alignment and for General Dynamic Programming
ABSTRACT. Reconfigurable systolic arrays can be adapted to efficiently resolve a wide spectrum of computational problems; parallelism is naturally explored in systolic arrays and r...
Ricardo P. Jacobi, Mauricio Ayala-Rincón, L...
ICCSA
2004
Springer
14 years 2 months ago
A Sequence-Focused Parallelisation of EMBOSS on a Cluster of Workstations
Abstract. A number of individual bioinformatics applications (particularly BLAST and other sequence searching methods) have recently been implemented over clusters of workstations ...
Karl Podesta, Martin Crane, Heather J. Ruskin