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BMCBI
2004
140views more  BMCBI 2004»
13 years 7 months ago
What can we learn from noncoding regions of similarity between genomes?
Background: In addition to known protein-coding genes, large amounts of apparently non-coding sequence are conserved between the human and mouse genomes. It seems reasonable to as...
Thomas A. Down, Tim J. P. Hubbard
CBMS
2008
IEEE
14 years 1 months ago
ProtCV: A Tool for Extracting, Visualizing and Validating Protein Clusters Using Mass Spectra Peak-Lists
We present ProtCV (Protein Clustering and Visualization) a new software tool for grouping samples (mass spectra peak-lists) emanating from a high throughput proteomics analysis ba...
Stavroula Ventoura, Eugenia G. Giannopoulou, Elias...
BMCBI
2010
114views more  BMCBI 2010»
13 years 7 months ago
Detection of gene orthology from gene co-expression and protein interaction networks
Background: Ortholog detection methods present a powerful approach for finding genes that participate in similar biological processes across different organisms, extending our und...
Fadi Towfic, Susan VanderPlas, Casey A. Oliver, Ol...
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SIGIR
2010
ACM
13 years 11 months ago
Query similarity by projecting the query-flow graph
Defining a measure of similarity between queries is an interesting and difficult problem. A reliable query-similarity measure can be used in a variety of applications such as que...
Ilaria Bordino, Carlos Castillo, Debora Donato, Ar...
ICPR
2002
IEEE
14 years 10 days ago
Extracting Fractal Features for Analyzing Protein Structure
This paper is concerned with the development of a computational methodology based on fractal geometry for determining 3D structure of protein with imagery projection operations. I...
Yu Tao, Thomas R. Ioerger, James C. Sacchettini